mirDIP : microRNA Data Integration Portal

Find microRNAs that target a gene, or genes targeted by a microRNA, in Homo sapiens.

Search :
- You may enter a list of HUGO Gene Symbols (case sensitive) or MicroRNAs (in the format hsa-miR-xxx, case sensitive) delimited by: spaces, tabs, commas or semicolons.

Integrated score :
Combines confidence scores from all available predictions.

Results download :
- Do not use IE to download search results. Use either Chrome or Firefox browser.

Example search :
- Gene symbols : AKAP17A,AKR1C2,APP,zZz3,MARK4,C17orf51,PRKY, C11orf85, ZZZ, Xx, yY, CPAMD9, FLJ23569
- MicroRNA symbols : hsa-miR-603,hsa-let-7a-3p,hsa-miR-625-5p,hsa-miR-7852-3p,hsa-miR-17-5p, hsa-mir-25-5p,hsa-miR-4433-3p,hsa-mir-891a,hsa-mir-9,hsa-mir-9*,hsa-mir-1-5p,hsa-miR-0

If you are looking for individual resources results, please use Bidirectional Search tab
Gene Symbol


Micro RNA
Search Options
Score class

Minimum Score:  

Use this option to filter Score class.
Score class
Top 1% Very High
Top 5% High
Top 1/3 Medium
Bottom 2/3 Low

All contents copyright: Jurisica Lab, Krembil Research Institute - the University Health Network, Toronto, Canada. Last modified Nov. 2020. (Version, Database version

All downloads and use of this database are subject to the following terms.

Permission to use, copy, and modify this database hereby granted to all academic and not-for-profit institutions without fee, provided that name of organization and author appear in all copies of the database. Under these conditions, the permission to modify and distribute or to make extended versions of the database is explicitly granted to non-profit organizations. All commercial entities willing to download or use the database must contact the authors. This database is provided "AS-IS" and with out any warranty of any kind. In no event shall Krembil Research Institute - the University Health Network or the authors be liable for any consequential damage of any kind, or any damages resulting from the use of this database.

- Tokar T, Pastrello C, Rossos AEM, Abovsky M, Hauschild AC, Tsay M, Lu R, Jurisica I. mirDIP 4.1-integrative database of human microRNA target predictions. Nucleic Acids Res. 2018 Jan 4;46(D1):D360-D370. doi: 10.1093/nar/gkx1144. PubMed PMID: 29194489; PubMed Central PMCID: PMC5753284
- Shirdel EA, Xie W, Mak TW, Jurisica I, 2011 NAViGaTing the Micronome. Using Multiple MicroRNA Prediction Databases to Identify Signalling Pathway-Associated MicroRNAs. PLoS ONE 6(2): e17429. doi:10.1371/journal.pone.0017429