mirDIP : microRNA Data Integration Portal


For pathway annotation of the miRNA we recommend to use miRAnno

Unidirectional Search.

Find microRNAs that target a gene, or genes targeted by a microRNA, in Homo sapiens.



Gene Symbol  
   
  or  
miRNAs  
   


Search :
- You may enter a list of HUGO Gene Symbols (case sensitive) or MicroRNAs (case sensitive) delimited by: spaces, tabs, commas or semicolons.

Integrated score :
Combines confidence scores from all available predictions.

Results download :
- We support Chrome, Edge or Firefox browsers.

Example search :
- Gene symbols : APP,MARK4,C17orf51,PRKY
- MicroRNA symbols : hsa-miR-603,hsa-let-7a-3p,hsa-miR-625-5p,hsa-miR-7852-3p,hsa-miR-177-5p


If you are looking for individual resources results, please use Bidirectional Search tab






Search Options

Score class


Minimum Score:  

Use this option to filter Score class.
Score class
Top 1% Very High
Top 5% High
Top 1/3 Medium
Bottom 2/3 Low




May take 2-3 minutes to complete. Please wait.




All contents copyright: Jurisica Lab, Schroeder Arthritis Institute, Krembil Research Institute - the University Health Network, Toronto, Canada. Last modified June 28, 2022. (Version 5.1.16.1, Database version 5.1.12.1)

All downloads and use of this database are subject to the following terms.

Permission to use, copy, and modify this database hereby granted to all academic and not-for-profit institutions without fee, provided that name of organization and author appear in all copies of the database. Under these conditions, the permission to modify and distribute or to make extended versions of the database is explicitly granted to non-profit organizations. All commercial entities willing to download or use the database must contact the authors. This database is provided "AS-IS" and with out any warranty of any kind. In no event shall Krembil Research Institute - the University Health Network or the authors be liable for any consequential damage of any kind, or any damages resulting from the use of this database.

Reference:
- Tokar T, Pastrello C, Rossos AEM, Abovsky M, Hauschild AC, Tsay M, Lu R, Jurisica I. mirDIP 4.1-integrative database of human microRNA target predictions. Nucleic Acids Res. 2018 Jan 4;46(D1):D360-D370. doi: 10.1093/nar/gkx1144. PubMed PMID: 29194489; PubMed Central PMCID: PMC5753284
- Shirdel EA, Xie W, Mak TW, Jurisica I, 2011 NAViGaTing the Micronome. Using Multiple MicroRNA Prediction Databases to Identify Signalling Pathway-Associated MicroRNAs. PLoS ONE 6(2): e17429. doi:10.1371/journal.pone.0017429