Welcome
pathDIP 5 is an annotated database of signalling cascades in human and 16 non-human
organisms, comprising 6,535 pathways, and covering 195148 genes and 5783 metabolites.
pathDIP 5 substantially improves its integration into complex bioinformatics workflows,
with programmatic and web-based enrichment analysis, knowledge-based pathway consolidation,
integration with external tools such as Drugst.One, and implementation of multiple charts
and heatmaps.
Please cite the following paper for this database:
Pastrello C, Kotlyar M, Abovsky M, Lu R, Jurisica I. PathDIP 5: improving
coverage and making enrichment analysis more biologically meaningful.
Nucleic Acids Res. 52(D1):D663-D671, 2024.
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