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Aliases & Descriptions for GRAP2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| GADS 1, 2, 3 | | GRAP-2 2 | | GRB2L 2, 3 | | GRBLG 1, 2, 3 | | GRBX 3 | | GRID 2, 3, 5 | | GRPL 2 | | GrbX 1, 2 | | Grf-40 3 | | Grf40 1, 2 | | Mona 1, 2 | | OTTHUMP00000028837 2 | | P38 2, 3 |
| | | Descriptions |
|---|
| Adapter protein GRID 3 | | GRB-2-like protein 2, 3 | | GRB2-related adaptor protein 2 2 | | GRB2-related protein with insert domain 2 | | Grf40 adapter protein 3 | | Growth factor receptor-binding protein 2, 3 | | Hematopoietic cell-associated adapter protein GrpL 3 | | Protein GADS 3 | | SH3-SH2-SH3 adapter Mona 3 | | SH3-SH2-SH3 adaptor molecule 2 | growth factor receptor-bound protein 2-related adaptor protein 2 2 | | hematopoietic cell-associated adaptor protein GRPL 2 |
|
| | Search outside databases for aliases for GRAP2 genePrevious GC identifers: GC22P036911 GC22P038540 |
Summaries for GRAP2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for GRAP2: This gene encodes a member of the GRB2/Sem5/Drk family. This member is an adaptor-like protein involved in leukocyte-specific protein-tyrosine kinase signaling. Like its related family member, GRB2-related adaptor protein (GRAP), this protein contains an SH2 domain flanked by two SH3 domains. This protein interacts with other proteins, such as GRB2-associated binding protein 1 (GAB1) and the SLP-76 leukocyte protein (LCP2), through its SH3 domains. Transcript variants utilizing alternative polyA sites exist. [provided by RefSeq] UniProtKB/Swiss-Prot: GRAP2_HUMAN, O75791Function: Interacts with SLP-76 to regulate NF-AT activation. Binds to tyrosine-phosphorylated shcGene Wiki entry for GRAP2 |
Genomic Location for GRAP2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the GRAP2 gene 
Entrez Gene cytogenetic band: 22q13.2 Ensembl cytogenetic band: 22q13.1 HGNC cytogenetic band: 22q13.2GRAP2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22P038621:
(about GC identifiers)
Start:
|
38,627,032 bp from pter |
End:
|
38,698,204 bp from pter |
Size:
|
71,173 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011520.11
| Proteins for GRAP2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: GRAP2_HUMAN, O75791 (See
protein sequence)Recommended Name: GRB2-related adapter protein 2 Size: 330 amino acids; 37909 Da
Subunit: Interacts with phosphorylated LIME1 upon TCR activation (By similarity). Interacts with phosphorylated LAT and LAX1 upon TCR activation. Interacts with SHB
Secondary accessions: O43726 Q9NRB7Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004801.1
ENSEMBL proteins: ENSP00000385607 ENSP00000339186
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: GRAP2 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for GRAP2: Assays for GRAP2: | Protein
Domains/ Families for GRAP2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry O75791
ProtoNet protein and cluster: O75791 2 Blocks protein families: IPB000980 SH2 domain signature IPB001452 SH3 domain signature
UniProtKB/Swiss-Prot: GRAP2_HUMAN, O75791Similarity: Belongs to the GRB2/sem-5/DRK familySimilarity: Contains 1 SH2 domainSimilarity: Contains 2 SH3 domains | Gene Function for GRAP2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004810
Applied Biosystems Silencer® siRNAs for GRAP2
Sigma-Aldrich siRNA for GRAP2  Sigma-Aldrich shRNA for GRAP2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004810                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004810                                  untagged cDNA clone in CMV expression vector: NM_004810 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004810
UniProtKB/Swiss-Prot: GRAP2_HUMAN, O75791Function: Interacts with SLP-76 to regulate NF-AT activation. Binds to tyrosine-phosphorylated shcGenatlas biochemistry entry for GRAP2:Grb2-related adaptor protein 2,expressed in thymus and spleen interacting with cKIT,EPOR,coupling tyrosine kinase to the RAS pathway2 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Grap2):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for GRAP2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5 Sigma-Aldrich "Your Favorite Gene" Pathways for GRAP2 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for GRAP2 
5/57 Interacting proteins for GRAP2 (O757912 ENSP000003391863) via UniProtKB, MINT, and/or STRING (see all 57
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for GRAP2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for GRAP2 4 Novoseek chemical compound relationships for GRAP2 gene
About this table
|
Transcripts for GRAP2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004810
Sigma-Aldrich siRNA for GRAP2  Sigma-Aldrich shRNA for GRAP2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004810 REFSEQ mRNAs for GRAP2 gene: NM_004810.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004810               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004810                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004810                                  untagged cDNA clone in CMV expression vector: NM_004810  Additional cDNA sequence: AF042380.1 AF090456.1 AF102694.1 AF121002.1 AF129476.1 AF236119.1 AF236120.1 AJ011736.1 AK303280.1 AK303332.1 AK303470.1 AK303512.1 AK303657.1 AK312830.1 AY069959.1 BC025692.1 BC026002.1 CR456498.1 CR536524.1 CR541849.1 CR598431.1 CR604186.1 CR607150.1 Y18051.1 9 DOTS entries: DT.433702 DT.95171199 DT.100017167 DT.87015062 DT.100670611 DT.407834 DT.120671271 DT.120671280 DT.97777471 24/75 AceView cDNA sequences (see all 75
):CR456498 NM_004810 CR604186 AI248165 AF042380 BC025692 AF236120 AA669142 AF090456 CR536524 N57907 CR607150 H55177 CR598431 BX437694 BX387888 AF102694 BI772011 R02185 CD619360 AF236119 BC026002 BI912538 AW024274
highest scoring ESTs for GRAP2:AJ011736 AF042380 AF090456 AF102694 AF121002 AF129476 AF236119 AF236120 AI277343 AI291777 Unigene Cluster for GRAP2: GRB2-related adaptor protein 2 Hs.517499 [show with all ESTs]Unigene Representative Sequence: CR604186
GeneLoc Exon Structure
2 Alternative Splicing Database (ASD) splice patterns (SP) for GRAP2
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for GRAP2
2 Ensembl transcripts including schematic representations: ENST00000407075
ENST00000344138
|
Expression for GRAP2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| GRAP2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for GRAP2
1 / 2 / 3 5 probe-sets matching GRAP2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: ACTATATATA
SOURCE GeneReport for Unigene cluster: Hs.517499
|
Orthologs for GRAP2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for GRAP2 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for GRAP2
ENSEMBL Gene Tree for GRAP2 | Paralogs for GRAP2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for GRAP2 gene
- GRB22
|
SNPs/Variants for GRAP2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for GRAP2 (up to first 250kb)
|
Disorders & Mutations for GRAP2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 604518
2 Novoseek disease relationships for GRAP2 gene
About this table
Genetic Association Database: GRAP2 Human Genome Epidemiology Navigator: GRAP2 (1 document)
|
Medical News for GRAP2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for GRAP2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/72 PubMed articles for GRAP2 gene (see all 72
):- Molecular cloning and expression of human grap-2, a novel leukocyte- specific SH2- and SH3-containing adaptor-like protein that binds to gab-1. (PubMed id 9878555)1, 2, 3, 4 Qiu M....Liu M. (1998)
- Grf40, A novel Grb2 family member, is involved in T cell signaling through interaction with SLP-76 and LAT. (PubMed id 10224278)2, 3, 4 Asada H....Sugamura K. (1999)
- Association of Grb2, Gads, and phospholipase C-gamma 1 with phosphorylated LAT tyrosine residues. Effect of LAT tyrosine mutations on T cell angigen receptor-mediated signaling. (PubMed id 10811803)1, 3, 4 Zhang W.... Samelson L.E. (2000)
- Genetic variations in humans associated with differences in the course of hepatitis C. (PubMed id 15063762)3, 6 Saito T....Kawata S. (2004)
- A genome annotation-driven approach to cloning the human ORFeome. (PubMed id 15461802)3, 4 Collins J.E.... Dunham I. (2004)
- Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. (PubMed id 15144186)3, 4 Brill L.M....Peters E.C. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry. (PubMed id 12522270)3, 4 Salomon A.R.... Peters E.C. (2003)
- Genomic organization and restricted expression of the human Mona/Gads gene suggests regulation by two specific promoters. (PubMed id 12062812)3, 4 Guyot B.... Mouchiroud G. (2002)
- Molecular cloning of a novel gene encoding a membrane-associated adaptor protein (LAX) in lymphocyte signaling. (PubMed id 12359715)3, 4 Zhu M.... Zhang W. (2002)
|
Search for GRAP2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing GRAP2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing GRAP2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GRAP2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for GRAP2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for GRAP2:

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Incremental update: 13 Oct 2009
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